Target Binding Site Detail
| Target General Information | Top | ||||
|---|---|---|---|---|---|
| Target ID | T66252 | Target Info | |||
| Target Name | Dipeptidyl peptidase 9 (DPP-9) | ||||
| Synonyms | Dipeptidyl peptidase-like protein 9; Dipeptidyl peptidase IX; Dipeptidyl peptidase IV-related protein 2; DPRP2; DPRP-2; DPP IX; DPLP9; DP9 | ||||
| Target Type | Clinical trial Target | ||||
| Gene Name | DPP9 | ||||
| Biochemical Class | Peptidase | ||||
| UniProt ID | |||||
| Ligand General Information | Top | ||||
|---|---|---|---|---|---|
| Ligand Name | [(2R)-1-[(2R)-2-amino-3-methylbutanoyl]pyrrolidin-2-yl]boronic acid | Ligand Info | |||
| Canonical SMILES | B(C1CCCN1C(=O)C(C(C)C)N)(O)O | ||||
| InChI | 1S/C9H19BN2O3/c1-6(2)8(11)9(13)12-5-3-4-7(12)10(14)15/h6-8,14-15H,3-5,11H2,1-2H3/t7-,8+/m0/s1 | ||||
| InChIKey | FKCMADOPPWWGNZ-JGVFFNPUSA-N | ||||
| PubChem Compound ID | 9942554 | ||||
| Drug Binding Sites of Target | Top | |||||
|---|---|---|---|---|---|---|
| PDB ID: 6X6C Cryo-EM structure of NLRP1-DPP9-VbP complex | ||||||
| Method | Electron microscopy | Resolution | 2.90 Å | Mutation | No | [1] |
| PDB Sequence |
DDPAARFQVQ
27 KHSWDGLRSI37 IHGSRKYSGL47 IVNKAPHDFQ57 FVQKTDESGP67 HSHRLYYLGM 77 PYGSRENSLL87 YSEIPKKVRK97 EALLLLSWKQ107 MLDHFQATPH117 HGVYSREEEL 127 LRERKRLGVF137 GITSYDFHSE147 SGLFLFQASN157 SLFHCRDGGK167 NGFMVSPMKP 177 LEIKTQCSGP187 RMDPKICPAD197 PAFFSFINNS207 DLWVANIETG217 EERRLTFCHQ 227 GLSNVLDDPK237 SAGVATFVIQ247 EEFDRFTGYW257 WCPTASWEGS267 EGLKTLRILY 277 EEVDESEVEV287 IHVPSPALEE297 RKTDSYRYPR307 TGSKNPKIAL317 KLAEFQTDSQ 327 GKIVSTQEKE337 LVQPFSSLFP347 KVEYIARAGW357 TRDGKYAWAM367 FLDRPQQWLQ 377 LVLLPPALFI387 PSTENEEQRL397 ASARAVPRNV407 QPYVVYEEVT417 NVWINVHDIF 427 YPFPQSEGED437 ELCFLRANEC447 KTGFCHLYKV457 TAVLKSQGYD467 WSEPFSPGED 477 EFKCPIKEEI487 ALTSGEWEVL497 ARHGSKIWVN507 EETKLVYFQG517 TKDTPLEHHL 527 YVVSYEAAGE537 IVRLTTPGFS547 HSCSMSQNFD557 MFVSHYSSVS567 TPPCVHVYKL 577 SGPDDDPLHK587 QPRFWASMME597 AASCPPDYVP607 PEIFHFHTRS617 DVRLYGMIYK 627 PHALQPGKKH637 PTVLFVYGGP647 QVQLVNNSFK657 GIKYLRLNTL667 ASLGYAVVVI 677 DGRGSCQRGL687 RFEGALKNQM697 GQVEIEDQVE707 GLQFVAEKYG717 FIDLSRVAIH 727 GWSYGGFLSL737 MGLIHKPQVF747 KVAIAGAPVT757 VWMAYDTGYT767 ERYMDVPENN 777 QHGYEAGSVA787 LHVEKLPNEP797 NRLLILHGFL807 DENVHFFHTN817 FLVSQLIRAG 827 KPYQLQIYPN837 ERHSIRCPES847 GEHYEVTLLH857 FLQEYL
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| PDB ID: 7JN7 Human DPP9-CARD8 complex | ||||||
| Method | Electron microscopy | Resolution | 3.30 Å | Mutation | No | [2] |
| PDB Sequence |
DDPAARFQVQ
27 KHSWDGLRSI37 IHGSRKYSGL47 IVNKAPHDFQ57 FVQKTDESGP67 HSHRLYYLGM 77 PYGSRENSLL87 YSEIPKKVRK97 EALLLLSWKQ107 MLDHFQATPH117 HGVYSREEEL 127 LRERKRLGVF137 GITSYDFHSE147 SGLFLFQASN157 SLFHCRDGGK167 NGFMVSPMKP 177 LEIKTQCSGP187 RMDPKICPAD197 PAFFSFINNS207 DLWVANIETG217 EERRLTFCHQ 227 GLSNVLDDPK237 SAGVATFVIQ247 EEFDRFTGYW257 WCPTASWEGS267 EGLKTLRILY 277 EEVDESEVEV287 IHVPSPALEE297 RKTDSYRYPR307 TGSKNPKIAL317 KLAEFQTDSQ 327 GKIVSTQEKE337 LVQPFSSLFP347 KVEYIARAGW357 TRDGKYAWAM367 FLDRPQQWLQ 377 LVLLPPALFI387 PSTENEEQRL397 ASARAVPRNV407 QPYVVYEEVT417 NVWINVHDIF 427 YPFPQSEGED437 ELCFLRANEC447 KTGFCHLYKV457 TAVLKSQGYD467 WSEPFSPGED 477 EFKCPIKEEI487 ALTSGEWEVL497 ARHGSKIWVN507 EETKLVYFQG517 TKDTPLEHHL 527 YVVSYEAAGE537 IVRLTTPGFS547 HSCSMSQNFD557 MFVSHYSSVS567 TPPCVHVYKL 577 SGPDDDPLHK587 QPRFWASMME597 AASCPPDYVP607 PEIFHFHTRS617 DVRLYGMIYK 627 PHALQPGKKH637 PTVLFVYGGP647 QVQLVNNSFK657 GIKYLRLNTL667 ASLGYAVVVI 677 DGRGSCQRGL687 RFEGALKNQM697 GQVEIEDQVE707 GLQFVAEKYG717 FIDLSRVAIH 727 GWSYGGFLSL737 MGLIHKPQVF747 KVAIAGAPVT757 VWMAYDTGYT767 ERYMDVPENN 777 QHGYEAGSVA787 LHVEKLPNEP797 NRLLILHGFL807 DENVHFFHTN817 FLVSQLIRAG 827 KPYQLQIYPN837 ERHSIRCPES847 GEHYEVTLLH857 FLQEYL
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| References | Top | ||||
|---|---|---|---|---|---|
| REF 1 | DPP9 sequesters the C?terminus of NLRP1 to repress inflammasome activation. Nature. 2021 Apr;592(7856):778-783. | ||||
| REF 2 | Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment. Immunity. 2021 Jul 13;54(7):1392-1404.e10. | ||||
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