Target Binding Site Detail
Target General Information | Top | ||||
---|---|---|---|---|---|
Target ID | T55654 | Target Info | |||
Target Name | cAMP-dependent chloride channel (CFTR) | ||||
Synonyms | cAMPdependent chloride channel; Cystic fibrosis transmembrane conductance regulator; Channel conductancecontrolling ATPase; ATPbinding cassette subfamily C member 7; ATP-binding cassette sub-family C member 7; ABCC7 | ||||
Target Type | Successful Target | ||||
Gene Name | CFTR | ||||
Biochemical Class | ABC transporter | ||||
UniProt ID |
Ligand General Information | Top | ||||
---|---|---|---|---|---|
Ligand Name | Adenosine triphosphate | Ligand Info | |||
Canonical SMILES | C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N | ||||
InChI | 1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1 | ||||
InChIKey | ZKHQWZAMYRWXGA-KQYNXXCUSA-N | ||||
PubChem Compound ID | 5957 |
Drug Binding Sites of Target | Top | |||||
---|---|---|---|---|---|---|
PDB ID: 7SVD The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809) | ||||||
Method | Electron microscopy | Resolution | 2.70 Å | Mutation | Yes | [1] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEEGFGELFG 437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMVIMGELEP477 SEGKIKHSGR 487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE527 EDISKFAEKD 537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY577 LDVLTEKEIF 587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY627 GTFSELQNLW 846 NTYLRYITVH856 KSLIFVLIWC866 LVIFLAEVAA876 SLVVLWLLGN886 TPSYAVIITS 909 TSSYYVFYIY919 VGVADTLLAM929 GFFRGLPLVH939 TLITVSKILH949 HKMLHSVLQA 959 PMSTLNTLKA969 GGILNRFSKD979 IAILDDLLPL989 TIFDFIQLLL999 IVIGAIAVVA 1009 VLQPYIFVAT1019 VPVIVAFIML1029 RAYFLQTSQQ1039 LKQLESEGRS1049 PIFTHLVTSL 1059 KGLWTLRAFG1069 RQPYFETLFH1079 KALNLHTANW1089 FLYLSTLRWF1099 QMRIEMIFVI 1109 FFIAVTFISI1119 LTTGEGEGRV1129 GIILTLAMNI1139 MSTLQWAVNS1149 SIDVDSLMRS 1159 VSRVFKFIDM1169 PTEGIWPSGG1208 QMTVKDLTAK1218 YTEGGNAILE1228 NISFSISPGQ 1238 RVGLLGRTGS1248 GKSTLLSAFL1258 RLLNTEGEIQ1268 IDGVSWDSIT1278 LQQWRKAFGV 1288 IPQKVFIFSG1298 TFRKNLDPYE1308 QWSDQEIWKV1318 ADEVGLRSVI1328 EQFPGKLDFV 1338 LVDGGCVLSH1348 GHKQLMCLAR1358 SVLSKAKILL1368 LDQPSAHLDP1378 VTYQIIRRTL 1388 KQAFADCTVI1398 LCEHRIEAML1408 ECQQFLVIEE1418 NKVRQYDSIQ1428 KLLNERSLFR 1438 QAISPSDRVK1448 LFP
|
|||||
|
ASP173
4.773
TRP401
3.780
VAL440
4.066
SER459
4.052
THR460
2.898
GLY461
2.958
ALA462
3.236
GLY463
2.735
LYS464
2.842
THR465
3.187
SER466
3.273
GLN493
3.314
PHE533
3.776
ILE546
3.637
THR547
3.276
LEU548
4.145
SER549
3.507
GLY550
3.776
GLY551
3.089
GLN552
3.445
TYR577
4.413
ASN965
3.909
TYR1219
3.668
ILE1226
3.664
ARG1245
3.764
THR1246
2.840
GLY1247
2.706
SER1248
3.060
GLY1249
2.641
LYS1250
2.931
SER1251
3.262
THR1252
3.282
GLN1291
3.388
GLN1330
3.968
PHE1331
4.846
CYS1344
3.445
VAL1345
3.090
LEU1346
4.397
SER1347
3.248
HIS1348
3.404
GLY1349
3.469
HIS1350
4.078
HIS1402
3.103
|
|||||
PDB ID: 7SV7 The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Tezacaftor (VX-661) | ||||||
Method | Electron microscopy | Resolution | 3.80 Å | Mutation | Yes | [1] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEEGFGELFG 437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMVIMGELEP477 SEGKIKHSGR 487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE527 EDISKFAEKD 537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY577 LDVLTEKEIF 587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY627 GTFSELQNLW 846 NTYLRYITVH856 KSLIFVLIWC866 LVIFLAEVAA876 SLVVLWLLGN886 TPSYAVIITS 909 TSSYYVFYIY919 VGVADTLLAM929 GFFRGLPLVH939 TLITVSKILH949 HKMLHSVLQA 959 PMSTLNTLKA969 GGILNRFSKD979 IAILDDLLPL989 TIFDFIQLLL999 IVIGAIAVVA 1009 VLQPYIFVAT1019 VPVIVAFIML1029 RAYFLQTSQQ1039 LKQLESEGRS1049 PIFTHLVTSL 1059 KGLWTLRAFG1069 RQPYFETLFH1079 KALNLHTANW1089 FLYLSTLRWF1099 QMRIEMIFVI 1109 FFIAVTFISI1119 LTTGEGEGRV1129 GIILTLAMNI1139 MSTLQWAVNS1149 SIDVDSLMRS 1159 VSRVFKFIDM1169 PTEGIWPSGG1208 QMTVKDLTAK1218 YTEGGNAILE1228 NISFSISPGQ 1238 RVGLLGRTGS1248 GKSTLLSAFL1258 RLLNTEGEIQ1268 IDGVSWDSIT1278 LQQWRKAFGV 1288 IPQKVFIFSG1298 TFRKNLDPYE1308 QWSDQEIWKV1318 ADEVGLRSVI1328 EQFPGKLDFV 1338 LVDGGCVLSH1348 GHKQLMCLAR1358 SVLSKAKILL1368 LDQPSAHLDP1378 VTYQIIRRTL 1388 KQAFADCTVI1398 LCEHRIEAML1408 ECQQFLVIEE1418 NKVRQYDSIQ1428 KLLNERSLFR 1438 QAISPSDRVK1448 LFP
|
|||||
|
TRP401
3.370
VAL440
4.187
SER459
4.278
THR460
2.812
GLY461
3.193
ALA462
4.733
GLY463
3.477
LYS464
2.503
THR465
2.812
SER466
3.042
GLN493
2.738
LYS532
4.938
PHE533
3.582
ILE546
4.068
THR547
3.196
LEU548
3.939
SER549
3.243
GLY550
3.746
GLY551
2.775
GLN552
3.074
TYR577
4.177
ASN965
3.804
TYR1219
3.309
ILE1226
4.057
ARG1245
4.124
THR1246
3.534
GLY1247
3.220
SER1248
3.275
GLY1249
3.437
LYS1250
2.801
SER1251
2.771
THR1252
3.028
GLN1291
3.010
VAL1327
4.665
GLN1330
3.781
PHE1331
4.464
CYS1344
3.514
VAL1345
2.906
LEU1346
3.995
SER1347
3.715
HIS1348
4.150
GLY1349
3.621
HIS1350
3.973
ASP1370
4.772
HIS1402
3.523
|
|||||
PDB ID: 8EIO The complex of phosphorylated human delta F508 cystic fibrosis transmembrane conductance regulator (CFTR) with elexacaftor (VX-445), lumacaftor (VX-809) and ATP/Mg | ||||||
Method | Electron microscopy | Resolution | 2.80 Å | Mutation | Yes | [2] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEGTPVLKDI 444 NFKIERGQLL454 AVAGSTGAGK464 TSLLMVIMGE474 LEPSEGKIKH484 SGRISFCSQF 494 SWIMPGTIKE504 NIIGVSYDEY515 RYRSVIKACQ525 LEEDISKFAE535 KDNIVLGEGG 545 ITLSGGQRAR555 ISLARAVYKD565 ADLYLLDSPF575 GYLDVLTEKE585 IFESCVCKLM 595 ANKTRILVTS605 KMEHLKKADK615 ILILHEGSSY625 FYGTFSELQN635 LWNTYLRYIT 854 VHKSLIFVLI864 WCLVIFLAEV874 AASLVVLWLL884 GSYAVIITST910 SSYYVFYIYV 920 GVADTLLAMG930 FFRGLPLVHT940 LITVSKILHH950 KMLHSVLQAP960 MSTLNTLKAG 970 GILNRFSKDI980 AILDDLLPLT990 IFDFIQLLLI1000 VIGAIAVVAV1010 LQPYIFVATV 1020 PVIVAFIMLR1030 AYFLQTSQQL1040 KQLESEGRSP1050 IFTHLVTSLK1060 GLWTLRAFGR 1070 QPYFETLFHK1080 ALNLHTANWF1090 LYLSTLRWFQ1100 MRIEMIFVIF1110 FIAVTFISIL 1120 TTGEGEGRVG1130 IILTLAMNIM1140 STLQWAVNSS1150 IDVDSLMRSV1160 SRVFKFIDMP 1170 TEGIWPSGGQ1209 MTVKDLTAKY1219 TEGGNAILEN1229 ISFSISPGQR1239 VGLLGRTGSG 1249 KSTLLSAFLR1259 LLNTEGEIQI1269 DGVSWDSITL1279 QQWRKAFGVI1289 PQKVFIFSGT 1299 FRKNLDPYEQ1309 WSDQEIWKVA1319 DEVGLRSVIE1329 QFPGKLDFVL1339 VDGGCVLSHG 1349 HKQLMCLARS1359 VLSKAKILLL1369 DQPSAHLDPV1379 TYQIIRRTLK1389 QAFADCTVIL 1399 CEHRIEAMLE1409 CQQFLVIEEN1419 KVRQYDSIQK1429 LLNERSLFRQ1439 AISPSDRVKL 1449 FP
|
|||||
|
TRP401
3.479
VAL440
4.032
SER459
3.748
THR460
3.577
GLY461
3.066
ALA462
3.311
GLY463
3.186
LYS464
2.844
THR465
2.655
SER466
3.184
GLN493
3.281
PHE533
3.996
ILE546
3.966
THR547
3.220
LEU548
4.126
SER549
2.744
GLY550
3.889
GLY551
2.815
GLN552
2.946
TYR577
4.279
ASN965
4.475
TYR1219
3.493
ILE1226
3.842
ARG1245
3.762
THR1246
3.498
GLY1247
2.971
SER1248
3.511
GLY1249
3.289
LYS1250
2.726
SER1251
2.702
THR1252
3.085
GLN1291
3.155
GLN1330
3.665
PHE1331
4.816
CYS1344
3.531
VAL1345
3.034
LEU1346
4.070
SER1347
3.078
HIS1348
3.333
GLY1349
2.761
HIS1350
4.023
HIS1375
4.796
HIS1402
3.375
|
|||||
PDB ID: 8EIQ The complex of phosphorylated human delta F508 cystic fibrosis transmembrane conductance regulator (CFTR) with Trikafta [elexacaftor (VX-445), tezacaftor (VX-661), ivacaftor (VX-770)] and ATP/Mg | ||||||
Method | Electron microscopy | Resolution | 3.00 Å | Mutation | Yes | [2] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEGTPVLKDI 444 NFKIERGQLL454 AVAGSTGAGK464 TSLLMVIMGE474 LEPSEGKIKH484 SGRISFCSQF 494 SWIMPGTIKE504 NIIGVSYDEY515 RYRSVIKACQ525 LEEDISKFAE535 KDNIVLGEGG 545 ITLSGGQRAR555 ISLARAVYKD565 ADLYLLDSPF575 GYLDVLTEKE585 IFESCVCKLM 595 ANKTRILVTS605 KMEHLKKADK615 ILILHEGSSY625 FYGTFSELQN635 LWNTYLRYIT 854 VHKSLIFVLI864 WCLVIFLAEV874 AASLVVLWLL884 GSYAVIITST910 SSYYVFYIYV 920 GVADTLLAMG930 FFRGLPLVHT940 LITVSKILHH950 KMLHSVLQAP960 MSTLNTLKAG 970 GILNRFSKDI980 AILDDLLPLT990 IFDFIQLLLI1000 VIGAIAVVAV1010 LQPYIFVATV 1020 PVIVAFIMLR1030 AYFLQTSQQL1040 KQLESEGRSP1050 IFTHLVTSLK1060 GLWTLRAFGR 1070 QPYFETLFHK1080 ALNLHTANWF1090 LYLSTLRWFQ1100 MRIEMIFVIF1110 FIAVTFISIL 1120 TTGEGEGRVG1130 IILTLAMNIM1140 STLQWAVNSS1150 IDVDSLMRSV1160 SRVFKFIDMP 1170 TEGIWPSGGQ1209 MTVKDLTAKY1219 TEGGNAILEN1229 ISFSISPGQR1239 VGLLGRTGSG 1249 KSTLLSAFLR1259 LLNTEGEIQI1269 DGVSWDSITL1279 QQWRKAFGVI1289 PQKVFIFSGT 1299 FRKNLDPYEQ1309 WSDQEIWKVA1319 DEVGLRSVIE1329 QFPGKLDFVL1339 VDGGCVLSHG 1349 HKQLMCLARS1359 VLSKAKILLL1369 DQPSAHLDPV1379 TYQIIRRTLK1389 QAFADCTVIL 1399 CEHRIEAMLE1409 CQQFLVIEEN1419 KVRQYDSIQK1429 LLNERSLFRQ1439 AISPSDRVKL 1449 FP
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:533 or .A:546 or .A:547 or .A:548 or .A:549 or .A:550 or .A:551 or .A:552 or .A:577 or .A:1219 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1291 or .A:1330 or .A:1344 or .A:1345 or .A:1346 or .A:1347 or .A:1348 or .A:1349 or .A:1350 or .A:1375 or .A:1402; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
TRP401
3.595
VAL440
4.392
SER459
4.445
THR460
3.725
GLY461
3.104
ALA462
3.691
GLY463
3.090
LYS464
2.523
THR465
2.655
SER466
3.184
GLN493
3.040
PHE533
3.988
ILE546
4.297
THR547
3.300
LEU548
4.120
SER549
2.429
GLY550
3.537
GLY551
2.662
GLN552
3.029
TYR577
4.350
TYR1219
3.529
ILE1226
4.241
ARG1245
4.119
THR1246
3.112
GLY1247
3.036
SER1248
3.724
GLY1249
3.252
LYS1250
2.602
SER1251
2.663
THR1252
3.045
GLN1291
3.183
GLN1330
3.711
CYS1344
3.703
VAL1345
2.907
LEU1346
4.160
SER1347
3.346
HIS1348
3.266
GLY1349
2.842
HIS1350
4.253
HIS1375
4.442
HIS1402
3.502
|
|||||
PDB ID: 8EIG The complex of phosphorylated human delta F508 cystic fibrosis transmembrane conductance regulator (CFTR) with elexacaftor (VX-445) and ATP/Mg | ||||||
Method | Electron microscopy | Resolution | 3.60 Å | Mutation | Yes | [2] |
PDB Sequence |
RSPLEKASVV
12 SKLFFSWTRP22 ILRKGYRQRL32 ELSDIYQIPS42 VDSADNLSEK52 LEREWDRELA 62 SKKNPKLINA72 LRRCFFWRFM82 FYGIFLYLGE92 VTKAVQPLLL102 GRIIASYDPD 112 NKEERSIAIY122 LGIGLCLLFI132 VRTLLLHPAI142 FGLHHIGMQM152 RIAMFSLIYK 162 KTLKLSSRVL172 DKISIGQLVS182 LLSNNLNKFD192 EGLALAHFVW202 IAPLQVALLM 212 GLIWELLQAS222 AFCGLGFLIV232 LALFQAGLGR242 MMMKYRDQRA252 GKISERLVIT 262 SEMIENIQSV272 KAYCWEEAME282 KMIENLRQTE292 LKLTRKAAYV302 RYFNSSAFFF 312 SGFFVVFLSV322 LPYALIKGII332 LRKIFTTISF342 CIVLRMAVTR352 QFPWAVQTWY 362 DSLGAINKIQ372 DFLQKQEYKT382 LEYNLTTTEV392 VMENVTAFWE402 GTPVLKDINF 446 KIERGQLLAV456 AGSTGAGKTS466 LLMVIMGELE476 PSEGKIKHSG486 RISFCSQFSW 496 IMPGTIKENI506 IGVSYDEYRY517 RSVIKACQLE527 EDISKFAEKD537 NIVLGEGGIT 547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY577 LDVLTEKEIF587 ESCVCKLMAN 597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY627 GTFSELQNLW846 NTYLRYITVH 856 KSLIFVLIWC866 LVIFLAEVAA876 SLVVLWLLGN886 TPSYAVIITS909 TSSYYVFYIY 919 VGVADTLLAM929 GFFRGLPLVH939 TLITVSKILH949 HKMLHSVLQA959 PMSTLNTLKA 969 GGILNRFSKD979 IAILDDLLPL989 TIFDFIQLLL999 IVIGAIAVVA1009 VLQPYIFVAT 1019 VPVIVAFIML1029 RAYFLQTSQQ1039 LKQLESEGRS1049 PIFTHLVTSL1059 KGLWTLRAFG 1069 RQPYFETLFH1079 KALNLHTANW1089 FLYLSTLRWF1099 QMRIEMIFVI1109 FFIAVTFISI 1119 LTTGEGEGRV1129 GIILTLAMNI1139 MSTLQWAVNS1149 SIDVDSLMRS1159 VSRVFKFIDM 1169 PTEGIWPSGG1208 QMTVKDLTAK1218 YTEGGNAILE1228 NISFSISPGQ1238 RVGLLGRTGS 1248 GKSTLLSAFL1258 RLLNTEGEIQ1268 IDGVSWDSIT1278 LQQWRKAFGV1288 IPQKVFIFSG 1298 TFRKNLDPYE1308 QWSDQEIWKV1318 ADEVGLRSVI1328 EQFPGKLDFV1338 LVDGGCVLSH 1348 GHKQLMCLAR1358 SVLSKAKILL1368 LDQPSAHLDP1378 VTYQIIRRTL1388 KQAFADCTVI 1398 LCEHRIEAML1408 ECQQFLVIEE1418 NKVRQYDSIQ1428 K
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:173 or .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:532 or .A:533 or .A:546 or .A:547 or .A:548 or .A:549 or .A:550 or .A:551 or .A:552 or .A:577 or .A:965 or .A:1219 or .A:1220 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1291 or .A:1375 or .A:1402; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
ASP173
3.256
TRP401
3.622
VAL440
3.975
SER459
3.439
THR460
3.507
GLY461
3.373
ALA462
3.100
GLY463
3.066
LYS464
3.123
THR465
2.816
SER466
3.549
GLN493
3.571
LYS532
4.853
PHE533
3.846
ILE546
3.813
THR547
3.246
LEU548
4.315
SER549
2.487
GLY550
3.813
|
|||||
PDB ID: 6MSM Phosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR) | ||||||
Method | Electron microscopy | Resolution | 3.20 Å | Mutation | Yes | [3] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEEGFGELFL 435 LGTPVLKDIN445 FKIERGQLLA455 VAGSTGAGKT465 SLLMVIMGEL475 EPSEGKIKHS 485 GRISFCSQFS495 WIMPGTIKEN505 IIFGVSYDEY515 RYRSVIKACQ525 LEEDISKFAE 535 KDNIVLGEGG545 ITLSGGQRAR555 ISLARAVYKD565 ADLYLLDSPF575 GYLDVLTEKE 585 IFESCVCKLM595 ANKTRILVTS605 KMEHLKKADK615 ILILHEGSSY625 FYGTFSELQN 635 LQTWNTYLRY852 ITVHKSLIFV862 LIWCLVIFLA872 EVAASLVVLW882 LLGNTPLNNS 902 YAVIITSTSS912 YYVFYIYVGV922 ADTLLAMGFF932 RGLPLVHTLI942 TVSKILHHKM 952 LHSVLQAPMS962 TLNTLKAGGI972 LNRFSKDIAI982 LDDLLPLTIF992 DFIQLLLIVI 1002 GAIAVVAVLQ1012 PYIFVATVPV1022 IVAFIMLRAY1032 FLQTSQQLKQ1042 LESEGRSPIF 1052 THLVTSLKGL1062 WTLRAFGRQP1072 YFETLFHKAL1082 NLHTANWFLY1092 LSTLRWFQMR 1102 IEMIFVIFFI1112 AVTFISILTT1122 GEGEGRVGII1132 LTLAMNIMST1142 LQWAVNSSID 1152 VDSLMRSVSR1162 VFKFIDMPTE1172 GDIWPSGGQM1210 TVKDLTAKYT1220 EGGNAILENI 1230 SFSISPGQRV1240 GLLGRTGSGK1250 STLLSAFLRL1260 LNTEGEIQID1270 GVSWDSITLQ 1280 QWRKAFGVIP1290 QKVFIFSGTF1300 RKNLDPYEQW1310 SDQEIWKVAD1320 EVGLRSVIEQ 1330 FPGKLDFVLV1340 DGGCVLSHGH1350 KQLMCLARSV1360 LSKAKILLLD1370 QPSAHLDPVT 1380 YQIIRRTLKQ1390 AFADCTVILC1400 EHRIEAMLEC1410 QQFLVIEENK1420 VRQYDSIQKL 1430 LNERSLFRQA1440 ISPSDRVKLF1450 P
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:173 or .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:529 or .A:532 or .A:533 or .A:546 or .A:547 or .A:548 or .A:549 or .A:550 or .A:551 or .A:552 or .A:577 or .A:965 or .A:1219 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1291 or .A:1330 or .A:1331 or .A:1344 or .A:1345 or .A:1346 or .A:1347 or .A:1348 or .A:1349 or .A:1350 or .A:1371 or .A:1375 or .A:1402; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
ASP173
4.491
TRP401
3.436
VAL440
3.302
SER459
3.984
THR460
3.546
GLY461
3.485
ALA462
3.644
GLY463
3.369
LYS464
2.695
THR465
2.627
SER466
2.867
GLN493
3.009
ASP529
4.740
LYS532
4.940
PHE533
3.326
ILE546
3.717
THR547
3.117
LEU548
4.866
SER549
2.893
GLY550
4.132
GLY551
2.972
GLN552
2.633
TYR577
4.126
ASN965
4.006
TYR1219
3.253
ILE1226
3.994
ARG1245
4.453
THR1246
2.780
GLY1247
3.387
SER1248
4.088
GLY1249
3.042
LYS1250
2.507
SER1251
2.639
THR1252
2.890
GLN1291
2.718
GLN1330
4.201
PHE1331
4.547
CYS1344
3.683
VAL1345
3.197
LEU1346
4.419
SER1347
3.424
HIS1348
3.683
GLY1349
2.752
HIS1350
4.031
GLN1371
4.646
HIS1375
4.513
HIS1402
3.858
|
|||||
PDB ID: 6O1V Complex of human cystic fibrosis transmembrane conductance regulator (CFTR) and GLPG1837 | ||||||
Method | Electron microscopy | Resolution | 3.20 Å | Mutation | Yes | [4] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEEGFGELFG 437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMVIMGELEP477 SEGKIKHSGR 487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE527 EDISKFAEKD 537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY577 LDVLTEKEIF 587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY627 GTFSELQNLQ 637 TWNTYLRYIT854 VHKSLIFVLI864 WCLVIFLAEV874 AASLVVLWLL884 GNTPLNNSYA 904 VIITSTSSYY914 VFYIYVGVAD924 TLLAMGFFRG934 LPLVHTLITV944 SKILHHKMLH 954 SVLQAPMSTL964 NTLKAGGILN974 RFSKDIAILD984 DLLPLTIFDF994 IQLLLIVIGA 1004 IAVVAVLQPY1014 IFVATVPVIV1024 AFIMLRAYFL1034 QTSQQLKQLE1044 SEGRSPIFTH 1054 LVTSLKGLWT1064 LRAFGRQPYF1074 ETLFHKALNL1084 HTANWFLYLS1094 TLRWFQMRIE 1104 MIFVIFFIAV1114 TFISILTTGE1124 GEGRVGIILT1134 LAMNIMSTLQ1144 WAVNSSIDVD 1154 SLMRSVSRVF1164 KFIDMPTEGD1202 IWPSGGQMTV1212 KDLTAKYTEG1222 GNAILENISF 1232 SISPGQRVGL1242 LGRTGSGKST1252 LLSAFLRLLN1262 TEGEIQIDGV1272 SWDSITLQQW 1282 RKAFGVIPQK1292 VFIFSGTFRK1302 NLDPYEQWSD1312 QEIWKVADEV1322 GLRSVIEQFP 1332 GKLDFVLVDG1342 GCVLSHGHKQ1352 LMCLARSVLS1362 KAKILLLDQP1372 SAHLDPVTYQ 1382 IIRRTLKQAF1392 ADCTVILCEH1402 RIEAMLECQQ1412 FLVIEENKVR1422 QYDSIQKLLN 1432 ERSLFRQAIS1442 PSDRVKLFP
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:173 or .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:529 or .A:532 or .A:533 or .A:546 or .A:547 or .A:548 or .A:549 or .A:550 or .A:551 or .A:552 or .A:577 or .A:965 or .A:1219 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1291 or .A:1330 or .A:1331 or .A:1344 or .A:1345 or .A:1346 or .A:1347 or .A:1348 or .A:1349 or .A:1350 or .A:1371 or .A:1375 or .A:1402; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
ASP173
4.436
TRP401
3.410
VAL440
3.354
SER459
3.960
THR460
3.468
GLY461
3.596
ALA462
3.385
GLY463
3.316
LYS464
2.814
THR465
2.643
SER466
2.746
GLN493
2.935
ASP529
4.736
LYS532
4.991
PHE533
3.256
ILE546
3.568
THR547
3.080
LEU548
4.818
SER549
2.915
GLY550
3.900
GLY551
2.815
GLN552
2.658
TYR577
4.172
ASN965
4.109
TYR1219
3.324
ILE1226
3.971
ARG1245
4.563
THR1246
3.164
GLY1247
3.388
SER1248
3.777
GLY1249
3.068
LYS1250
2.623
SER1251
2.543
THR1252
2.801
GLN1291
2.726
GLN1330
3.978
PHE1331
4.438
CYS1344
3.634
VAL1345
3.248
LEU1346
4.518
SER1347
3.551
HIS1348
3.372
GLY1349
2.678
HIS1350
4.133
GLN1371
4.706
HIS1375
4.581
HIS1402
3.723
|
|||||
PDB ID: 6O2P Complex of ivacaftor with cystic fibrosis transmembrane conductance regulator (CFTR) | ||||||
Method | Electron microscopy | Resolution | 3.30 Å | Mutation | Yes | [4] |
PDB Sequence |
MQRSPLEKAS
10 VVSKLFFSWT20 RPILRKGYRQ30 RLELSDIYQI40 PSVDSADNLS50 EKLEREWDRE 60 LASKKNPKLI70 NALRRCFFWR80 FMFYGIFLYL90 GEVTKAVQPL100 LLGRIIASYD 110 PDNKEERSIA120 IYLGIGLCLL130 FIVRTLLLHP140 AIFGLHHIGM150 QMRIAMFSLI 160 YKKTLKLSSR170 VLDKISIGQL180 VSLLSNNLNK190 FDEGLALAHF200 VWIAPLQVAL 210 LMGLIWELLQ220 ASAFCGLGFL230 IVLALFQAGL240 GRMMMKYRDQ250 RAGKISERLV 260 ITSEMIENIQ270 SVKAYCWEEA280 MEKMIENLRQ290 TELKLTRKAA300 YVRYFNSSAF 310 FFSGFFVVFL320 SVLPYALIKG330 IILRKIFTTI340 SFCIVLRMAV350 TRQFPWAVQT 360 WYDSLGAINK370 IQDFLQKQEY380 KTLEYNLTTT390 EVVMENVTAF400 WEEGFGELFG 437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMVIMGELEP477 SEGKIKHSGR 487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE527 EDISKFAEKD 537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY577 LDVLTEKEIF 587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY627 GTFSELQNLQ 637 TWNTYLRYIT854 VHKSLIFVLI864 WCLVIFLAEV874 AASLVVLWLL884 GNTPLNNSYA 904 VIITSTSSYY914 VFYIYVGVAD924 TLLAMGFFRG934 LPLVHTLITV944 SKILHHKMLH 954 SVLQAPMSTL964 NTLKAGGILN974 RFSKDIAILD984 DLLPLTIFDF994 IQLLLIVIGA 1004 IAVVAVLQPY1014 IFVATVPVIV1024 AFIMLRAYFL1034 QTSQQLKQLE1044 SEGRSPIFTH 1054 LVTSLKGLWT1064 LRAFGRQPYF1074 ETLFHKALNL1084 HTANWFLYLS1094 TLRWFQMRIE 1104 MIFVIFFIAV1114 TFISILTTGE1124 GEGRVGIILT1134 LAMNIMSTLQ1144 WAVNSSIDVD 1154 SLMRSVSRVF1164 KFIDMPTEGD1202 IWPSGGQMTV1212 KDLTAKYTEG1222 GNAILENISF 1232 SISPGQRVGL1242 LGRTGSGKST1252 LLSAFLRLLN1262 TEGEIQIDGV1272 SWDSITLQQW 1282 RKAFGVIPQK1292 VFIFSGTFRK1302 NLDPYEQWSD1312 QEIWKVADEV1322 GLRSVIEQFP 1332 GKLDFVLVDG1342 GCVLSHGHKQ1352 LMCLARSVLS1362 KAKILLLDQP1372 SAHLDPVTYQ 1382 IIRRTLKQAF1392 ADCTVILCEH1402 RIEAMLECQQ1412 FLVIEENKVR1422 QYDSIQKLLN 1432 ERSLFRQAIS1442 PSDRVKLFP
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:173 or .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:529 or .A:532 or .A:533 or .A:546 or .A:547 or .A:548 or .A:549 or .A:550 or .A:551 or .A:552 or .A:577 or .A:965 or .A:1219 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1291 or .A:1330 or .A:1331 or .A:1344 or .A:1345 or .A:1346 or .A:1347 or .A:1348 or .A:1349 or .A:1350 or .A:1370 or .A:1371 or .A:1375 or .A:1402; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
ASP173
4.451
TRP401
3.507
VAL440
3.283
SER459
3.917
THR460
3.509
GLY461
3.340
ALA462
3.116
GLY463
3.133
LYS464
2.767
THR465
2.725
SER466
2.732
GLN493
2.841
ASP529
4.882
LYS532
4.981
PHE533
3.278
ILE546
3.495
THR547
3.051
LEU548
4.449
SER549
3.164
GLY550
3.182
GLY551
2.756
GLN552
2.702
TYR577
3.932
ASN965
3.990
TYR1219
3.286
ILE1226
3.985
ARG1245
4.108
THR1246
3.279
GLY1247
3.406
SER1248
3.367
GLY1249
3.268
LYS1250
2.748
SER1251
2.727
THR1252
2.598
GLN1291
2.859
GLN1330
3.599
PHE1331
4.695
CYS1344
3.716
VAL1345
2.867
LEU1346
3.912
SER1347
3.509
HIS1348
3.420
GLY1349
2.676
HIS1350
4.399
ASP1370
4.797
GLN1371
4.480
HIS1375
4.437
HIS1402
3.496
|
|||||
PDB ID: 1XMI Crystal structure of human F508A NBD1 domain with ATP | ||||||
Method | X-ray diffraction | Resolution | 2.25 Å | Mutation | Yes | [5] |
PDB Sequence |
STTEVVMENV
397 TAFWEEGFGE407 LFEKSFSNFS434 LLGTPVLKDI444 NFKIERGQLL454 AVAGSTGAGK 464 TSLLMMIMGE474 LEPSEGKIKH484 SGRISFCSQF494 SWIMPGTIKE504 NIIAGVSYDE 514 YRYRSVIKAC524 QLEEDISKFA534 EKDNIVLGEG544 GITLSGGQRA554 RISLARAVYK 564 DADLYLLDSP574 FGYLDVLTEK584 EIFESCVCKL594 MANKTRILVT604 SKMEHLKKAD 614 KILILHEGSS624 YFYGTFSELQ634 NLQPDFSSKL644 MGCDSFDQFS654 AERRNSILTE 664 TLRRFSL
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2BBO Human NBD1 with Phe508 | ||||||
Method | X-ray diffraction | Resolution | 2.55 Å | Mutation | Yes | [6] |
PDB Sequence |
TTEVVMENVT
398 AFWEEGLGTP439 VLKDINFKIE449 RGQLLAVAGS459 TGAGKTSLLM469 MIMGELEPSE 479 GKIKHSGRIS489 FCSQFSWIMP499 GTIKENIIFG509 VSYDEYRYRS519 VIKACQLEED 529 ISKFAEKDNI539 VLGEGGITLS549 EGQQAKISLA559 RAVYKDADLY569 LLDSPFGYLD 579 VLTEKEIFES589 CVCKLMANKT599 RILVTSKMEH609 LKKADKILIL619 HEGSSYFYGT 629 FSELQNLQPD639 FSSKLMSFDQ652 FSAERRNSIL662 TETLRRFSLE672 GDAP |
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:403 or .A:404 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:577; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2BBS Human deltaF508 NBD1 with three solubilizing mutations | ||||||
Method | X-ray diffraction | Resolution | 2.05 Å | Mutation | Yes | [6] |
PDB Sequence |
STTEVVMENV
397 TAFWEEGFGE407 LFEKAKGTPV440 LKDINFKIER450 GQLLAVAGST460 GAGKTSLLMM 470 IMGELEPSEG480 KIKHSGRISF490 CSQNSWIMPG500 TIKENIIGVS511 YDEYRYRSVI 521 KACQLEEDIS531 KFAEKDNIVL541 ITLSGGQRAR555 ISLARAVYKD565 ADLYLLDSPF 575 GYLDVLTEKE585 IFESCVCKLM595 ANKTRILVTS605 KMEHLKKADK615 ILILHEGSSY 625 FYGTFSELQN635 LRPDFSSKLM645 SFDQFSAERR658 NSILTETLHR668 FSL |
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:659; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 4WZ6 Human CFTR aa389-678 (NBD1), deltaF508 with three solubilizing mutations, bound ATP | ||||||
Method | X-ray diffraction | Resolution | 2.05 Å | Mutation | Yes | [7] |
PDB Sequence |
TTEVVMENVT
398 AFWEEGFGEL408 FEKAKQSLLG437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL 467 LMMIMGELEP477 SEGKIKHSGR487 ISFCSQNSWI497 MPGTIKENII507 GVSYDEYRYR 517 SVIKACQLEE527 DISKFAEKDN537 IVLGITLSGG550 QRARISLARA560 VYKDADLYLL 570 DSPFGYLDVL580 TEKEIFESCV590 CKLMANKTRI600 LVTSKMEHLK610 KADKILILHE 620 GSSYFYGTFS630 ELQNLRPDFS640 SKLMSFDQFS653 AERRNSILTE663 TLHRFSLE |
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:469 or .A:493; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 1XMJ Crystal structure of human deltaF508 human NBD1 domain with ATP | ||||||
Method | X-ray diffraction | Resolution | 2.30 Å | Mutation | Yes | [5] |
PDB Sequence |
EVVMENVTAF
400 WETPVLKDIN445 FKIERGQLLA455 VAGSTGAGKT465 SLLMMIMGEL475 EPSEGKIKHS 485 GRISFCSQFS495 WIMPGTIKEN505 IIGVSYDEYR516 YRSVIKACQL526 EEDISKFAEK 536 DNIVLGEGGI546 TLSEGQQAKI556 SLARAVYKDA566 DLYLLDSPFG576 YLDVLTEKEI 586 FESCVCKLMA596 NKTRILVTSK606 MEHLKKADKI616 LILHEGSSYF626 YGTFSELQNL 636 QPDFSSKLMS649 FDQFSAERRN659 SILTETLRRF669 SLEGDA
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:402 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2BBT Human deltaF508 NBD1 with two solublizing mutations. | ||||||
Method | X-ray diffraction | Resolution | 2.30 Å | Mutation | Yes | [6] |
PDB Sequence |
TEVVMENVTA
399 FWEEGFGELF409 EKAKGTPVLK442 DINFKIERGQ452 LLAVAGSTGA462 GKTSLLMMIM 472 GELEPSEGKI482 KHSGRISFCS492 QNSWIMPGTI502 KENIIGVSYD513 EYRYRSVIKA 523 CQLEEDISKF533 AEKDNIVLGG545 ITLSGGQRAR555 ISLARAVYKD565 ADLYLLDSPF 575 GYLDVLTEKE585 IFESCVCKLM595 ANKTRILVTS605 KMEHLKKADK615 ILILHEGSSY 625 FYGTFSELQN635 LRPDFSSDSF650 DQFSAERRNS660 ILTETLHRF
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6GJQ human NBD1 of CFTR in complex with nanobody T27 | ||||||
Method | X-ray diffraction | Resolution | 2.49 Å | Mutation | Yes | [8] |
PDB Sequence |
DINFKIERGQ
452 LLAVAGSTGA462 GKTSLLMMIM472 GELEPSRISF490 CPQFSWIMPG500 TIKENIIFGV 510 SYDEYRYRSV520 IKACQLEEDI530 SKFPEKDNTV540 LGEGGITLSG550 GQRARISLAR 560 AVYKDADLYL570 LDSPFGYLDV580 LTEKEIFESC590 VCKLMANKTR600 ILVTSKMEHL 610 KKADKILILH620 EGSSYFYGTF630 SELQNLQ
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:443 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:572 or .A:622; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6ZE1 human NBD1 of CFTR in complex with nanobody G11a | ||||||
Method | X-ray diffraction | Resolution | 2.71 Å | Mutation | Yes | [9] |
PDB Sequence |
NGDDSLFFSN
432 FSLLGTPVLK442 DINFKIERGQ452 LLAVAGSTGA462 GKTSLLMMIM472 GELEPSEGKI 482 KHSGRISFCP492 QFSWIMPGTI502 KENIIFGVSY512 DEYRYRSVIK522 ACQLEEDISK 532 FPEKDNTVLG542 EGGITLSGGQ552 RARISLARAV562 YKDADLYLLD572 SPFGYLDVLT 582 EKEIFESCVC592 KLMANKTRIL602 VTSKMEHLKK612 ADKILILHEG622 SSYFYGTFSE 632 LQNLQ
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:572 or .A:603; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2PZG Minimal human CFTR first nucleotide binding domain as a monomer | ||||||
Method | X-ray diffraction | Resolution | 1.80 Å | Mutation | Yes | [10] |
PDB Sequence |
TEVVMENVTA
399 FWEEGGTPVL441 KDINFKIERG451 QLLAVAGSTG461 AGKTSLLMMI471 MGELEPSEGK 481 IKHSGRISFC491 SQFSWIMPGT501 IKENIIFGVS511 YDEYRYRSVI521 KACQLEEDIS 531 KFAEKDNIVL541 GEGGITLSGG551 QRARISLARA561 VYKDADLYLL571 DSPFGYLDVL 581 TEKEIFESCV591 CKLMANKTRI601 LVTSKMEHLK611 KADKILILHE621 GSSYFYGTFS 631 ELQNPDFSSK643 LMG
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:469 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2PZE Minimal human CFTR first nucleotide binding domain as a head-to-tail dimer | ||||||
Method | X-ray diffraction | Resolution | 1.70 Å | Mutation | Yes | [10] |
PDB Sequence |
SLTTTEVVME
395 NVTAFWEEGG437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMMIMGELEP 477 SEGKIKHSGR487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE 527 EDISKFAEKD537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY 577 LDVLTEKEIF587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY 627 GTFSELQNLD639 FSSKLM
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 5TF7 Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP | ||||||
Method | X-ray diffraction | Resolution | 1.93 Å | Mutation | Yes | [11] |
PDB Sequence |
TEVVMENVTA
399 FWEEGGTPVL441 KDINFKIERG451 QLLAVAGSTG461 AGKTSLLMMI471 MGELEPSEGK 481 IKHSGRISFC491 SQFSWIMPGT501 IKENIIFGVS511 YDEYRYRSVI521 KACQLEEDIS 531 KFAEKDNIVL541 GEGGITLSGG551 QRARISLARA561 VYKDADLYLL571 DSPFGYLDVL 581 TEKEIFESCV591 CKLMANKTRI601 LVTSKMEHLK611 KADKILILHE621 GSSYFYGTFS 631 ELQNLQ
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:469 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6GJS Human NBD1 of CFTR in complex with nanobodies D12 and T4 | ||||||
Method | X-ray diffraction | Resolution | 1.95 Å | Mutation | No | [8] |
PDB Sequence |
SLTTTEVVME
395 NVTAFWEEGG437 TPVLKDINFK447 IERGQLLAVA457 GSTGAGKTSL467 LMMIMGELEP 477 SEGKIKHSGR487 ISFCSQFSWI497 MPGTIKENII507 FGVSYDEYRY517 RSVIKACQLE 527 EDISKFAEKD537 NIVLGEGGIT547 LSGGQRARIS557 LARAVYKDAD567 LYLLDSPFGY 577 LDVLTEKEIF587 ESCVCKLMAN597 KTRILVTSKM607 EHLKKADKIL617 ILHEGSSYFY 627 GTFSELQNL
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:469 or .A:493; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6UK1 Crystal structure of nucleotide-binding domain 2 (NBD2) of the human Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) | ||||||
Method | X-ray diffraction | Resolution | 2.69 Å | Mutation | Yes | [12] |
PDB Sequence |
DIWPSGGQMT
1211 VKDLTAKYTE1221 GGNAILENIS1231 FSISPGQRVG1241 LLGRTGSGKS1251 TLLLAFLRLL 1261 NTEGEIQIDG1271 VSWDSITLEQ1281 WRKAFGVIPQ1291 DVFIFSGTFR1301 KNLDPNEQWS 1311 DQEIWKVADE1321 VGLRSVIEQF1331 PGGLDFVLVD1341 GGCVLSHGHK1351 QLMCLARAVL 1361 SKAKILLLDE1371 PSAHLDPVTY1381 QIIRRTLKQA1391 FADCTVILCE1401 ARIEAMLECD 1411 QFLVIEENKV1421 RQYDSIQKL
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:1219 or .A:1226 or .A:1245 or .A:1246 or .A:1247 or .A:1248 or .A:1249 or .A:1250 or .A:1251 or .A:1252 or .A:1371 or .A:1375; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6GK4 Human NBD1 of CFTR in complex with nanobodies D12 and T8 | ||||||
Method | X-ray diffraction | Resolution | 2.91 Å | Mutation | No | [8] |
PDB Sequence |
TEVVMENVTA
399 FWPVLKDINF446 KIERGQLLAV456 AGSTGAGKTS466 LLMMIMGELE476 PSEGKIKHSG 486 RISFCSQFSW496 IMPGTIKENI506 IFGVSYDEYR516 YRSVIKACQL526 EEDISKFAEK 536 DNIVLGEGGI546 TLSGGQRARI556 SLARAVYKDA566 DLYLLDSPFG576 YLDVLTEKEI 586 FESCVCKLMA596 NKTRILVTSK606 MEHLKKADKI616 LILHEGSSYF626 YGTFSELQNL 636
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493 or .A:572; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6GKD human NBD1 of CFTR in complex with nanobodies D12 and G3a | ||||||
Method | X-ray diffraction | Resolution | 2.99 Å | Mutation | No | [8] |
PDB Sequence |
TTEVVMENVT
398 AFWEEGGTPV440 LKDINFKIER450 GQLLAVAGST460 GAGKTSLLMM470 IMGELEPSEG 480 KIKHSGRISF490 CSQFSWIMPG500 TIKENIIFGV510 SYDEYRYRSV520 IKACQLEEDI 530 SKFAEKDNIV540 LGEGGITLSG550 GQRARISLAR560 AVYKDADLYL570 LDSPFGYLDV 580 LTEKEIFESC590 VCKLMANKTR600 ILVTSKMEHL610 KKADKILILH620 EGSSYFYGTF 630 SELQNL
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:469 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 2PZF Minimal human CFTR first nucleotide binding domain as a head-to-tail dimer with delta F508 | ||||||
Method | X-ray diffraction | Resolution | 2.00 Å | Mutation | Yes | [10] |
PDB Sequence |
SLTTTEVVME
395 NVTAFWGGTP439 VLKDINFKIE449 RGQLLAVAGS459 TGAGKTSLLM469 MIMGELEPSE 479 GKIKHSGRIS489 FCSQFSWIMP499 GTIKENIIGV510 SYDEYRYRSV520 IKACQLEEDI 530 SKFAEKDNIV540 LGEGGITLSG550 GQRARISLAR560 AVYKDADLYL570 LDSPFGYLDV 580 LTEKEIFESC590 VCKLMANKTR600 ILVTSKMEHL610 KKADKILILH620 EGSSYFYGTF 630 SELQNLDFSS642 KLMG
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:401 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:493; color #f3c393; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
||||||
PDB ID: 6WBS Human CFTR first nucleotide binding domain with dF508/V510D | ||||||
Method | X-ray diffraction | Resolution | 1.86 Å | Mutation | Yes | [13] |
PDB Sequence |
TTTEVVMENV
429 TAFWEEGGTP439 VLKDINFKIE449 RGQLLAVAGS459 TGAGKTSLLM469 VIMGELEPSE 479 GKIKHSGRIS489 FCSQFSWIMP499 GTIKENIIGD510 SYDEYRYRSV520 IKACQLEEDI 530 SKFAEKDNIV540 LGEGGITLSG550 GQRARISLAR560 AVYKDADLYL570 LDSPFGYLDV 580 LTEKEIFESC590 VCKLMANKTR600 ILVTSKMEHL610 KKADKILILH620 EGSSYFYGTF 630 SELQN
|
|||||
Click to Show 3D Structure of This Binding Site
set background white;style ions nothing; color 8e8e8e;style chemicals nothing; select .ATP or .ATP2 or .ATP3 or :3ATP;style chemicals stick;color identity;select .A:433 or .A:434 or .A:440 or .A:458 or .A:459 or .A:460 or .A:461 or .A:462 or .A:463 or .A:464 or .A:465 or .A:466 or .A:467 or .A:469 or .A:493; color #00ffc7; zoom selection;set surface opacity 0.5;set surface Van der Waals surface;set mode all
|
References | Top | ||||
---|---|---|---|---|---|
REF 1 | Mechanism of CFTR correction by type I folding correctors. Cell. 2022 Jan 6;185(1):158-168.e11. | ||||
REF 2 | Molecular structures reveal synergistic rescue of Delta508 CFTR by Trikafta modulators. Science. 2022 Oct 21;378(6617):284-290. | ||||
REF 3 | Molecular structure of the ATP-bound, phosphorylated human CFTR. Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):12757-12762. | ||||
REF 4 | Structural identification of a hotspot on CFTR for potentiation. Science. 2019 Jun 21;364(6446):1184-1188. | ||||
REF 5 | Impact of the deltaF508 mutation in first nucleotide-binding domain of human cystic fibrosis transmembrane conductance regulator on domain folding and structure. J Biol Chem. 2005 Jan 14;280(2):1346-53. | ||||
REF 6 | Structure and dynamics of NBD1 from CFTR characterized using crystallography and hydrogen/deuterium exchange mass spectrometry. J Mol Biol. 2010 Feb 19;396(2):406-30. | ||||
REF 7 | Binding screen for cystic fibrosis transmembrane conductance regulator correctors finds new chemical matter and yields insights into cystic fibrosis therapeutic strategy. Protein Sci. 2016 Feb;25(2):360-73. | ||||
REF 8 | Domain-interface dynamics of CFTR revealed by stabilizing nanobodies. Nat Commun. 2019 Jun 14;10(1):2636. | ||||
REF 9 | A topological switch in CFTR modulates channel activity and sensitivity to unfolding. Nat Chem Biol. 2021 Sep;17(9):989-997. | ||||
REF 10 | Structures of a minimal human CFTR first nucleotide-binding domain as a monomer, head-to-tail homodimer, and pathogenic mutant. Protein Eng Des Sel. 2010 May;23(5):375-84. | ||||
REF 11 | Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain | ||||
REF 12 | A thermodynamically stabilized form of the second nucleotide binding domain from human CFTR shows a catalytically inactive conformation | ||||
REF 13 | Determining the Molecular Mechanism of Suppressor Mutation V510D and the Contribution of Helical Unraveling to the dF508-CFTR Defect |
If You Find Any Error in Data or Bug in Web Service, Please Kindly Report It to Dr. Zhou and Dr. Zhang.